Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903817.1_cds_XP_016453972.1_48043
CDS Infomation

[gene=LOC107778263] [db_xref=GeneID:107778263] [protein=transcription factor HBP-1b(c38)-like isoform X2] [protein_id=XP_016453972.1] [location=complement(join(225493..225642,228068..228307,229469..229731,229954..230029,230145..230222,230341..230400,230509..230577,230696..230830,230991..231070,231598..231698,231820..232079))] [gbkey=CDS]
Sequence

ATGGGATTTGAGAGAGCTTTTGTTGAGAGTTCACCTGAGCAAGAAAATAAGCTTTTTGTT
GGTGTTTCTTATATGGATTCCTCTAACAAAAACCAAGACCCGTTAGAGAGTAATAATCAG
ATATCATTTGGAGGTCAGCATCAACATCATCAACAACAGTTTTTTTATAATCATCATCAA
CAACAGCAGCTTCAAAATAATAATCAGATATCTTTTGGGATGATGCAACAATCATCTTCT
GCTATTCCTGGAAGTCTCATAAGCAAAGACAGTGCTGGAGCTTATGATTTAGGTGAACTA
GATCAAGCACTTTTTCAATATCTTGATGGCCAAGACCCTTCATCAATCCAAGAACAAAGA
CAAAATTCAGGGATGAGACCACCAACTCTGAACATATTTCCATCTCAACCCATGCATGTC
GAGCCATCAACAACAAATACGATGAATACTGGATTAGTTTCTCCAGCAATGAGTGGTTCC
AAGAGATCATCTCAGCCGTCCATGGAGTTGTCCAATAATCTCAAAAATAACGATGCTCCT
TCTGCTTCTGGTCCTGAACCACCAAAAGCTGCTAAGCGAGAGGGAAACAGGAAGGGTCCA
ACTTCAAGTTCAGAGCAAGATGGACCAAAAACACCAGATCCGAAGACATTAAGGAGACTT
GCTCAGAATAGAGAGGCAGCAAGGAAAAGTAGGCTTAGGAAAAAGGCTTATGTTCAACAG
CTAGAGTCAAGTAGAATCAGGCTTACTCAATTAGAGCAAGAGCTACAAAGGGCTAGAGCA
CAAGGATACTATTTTGGAGGAAACTCTCTTTTAGGAGGAGAAAAAAACCTTCCTGTTAAT
ATGGGCAACATGAGCTCAGTTTTCGACATGGAGTATGCGAGGTGGCTAGAGGAACACCAT
CGACTAATGTGCGAGCTTCGAAACGCAGTGCAAGAGCATTTTCTAGAAAACGAGCTTCGA
ATCTATGTCGACAATTGTGTAACACATTACGACGAGATAATGAACCTCAAGAGTATGCTT
GCAAAATCTGATGTCTTTCATCTTGTTTCTGGTATGTGGAAGACTCCAGCTGAACGTTGC
TTCATGTGGATGGGAGGGTTTCGGCCATCTGAGCTCCTCAAAATTATCCTGAGTCAGATT
GAGCCATTAACAGAACAACAACTTATGGGGATTTGTGGGTTACAACAATCAACACAAGAA
GCAGAGGATGCACTCTCTCAAGGGCTTGAAGCTCTTAATCACTCTCTCTCAGACACCATT
GCCTCTGATGCATTGTCTTGCCCTCAGAACATGGCCAATTACATGGGCCAAATGGCTCTT
GCCATGAACAAACTTTCCACTCTTGAAGGTTTTGTTCGACAGGCAGATAATTTGAGGCAC
CAAACAATTCATCGGCTGCATCAATTACTCACAACTCGTCAAGCCGCTAGGTGTTTTCTG
GCAATCGCTGAATATTTTCATCGGCTTCGAGCTCTCAGCTCTCTTTGGCTTGCGCGCCCT
CGACAAGAATAA

Peptide Sequence

PEP ID

XP_016453972.1
PEP Infomation

PREDICTED: transcription factor HBP-1b(c38)-like isoform X2 [Nicotiana tabacum]
Sequence

MGFERAFVESSPEQENKLFVGVSYMDSSNKNQDPLESNNQISFGGQHQHHQQQFFYNHHQ
QQQLQNNNQISFGMMQQSSSAIPGSLISKDSAGAYDLGELDQALFQYLDGQDPSSIQEQR
QNSGMRPPTLNIFPSQPMHVEPSTTNTMNTGLVSPAMSGSKRSSQPSMELSNNLKNNDAP
SASGPEPPKAAKREGNRKGPTSSSEQDGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQ
LESSRIRLTQLEQELQRARAQGYYFGGNSLLGGEKNLPVNMGNMSSVFDMEYARWLEEHH
RLMCELRNAVQEHFLENELRIYVDNCVTHYDEIMNLKSMLAKSDVFHLVSGMWKTPAERC
FMWMGGFRPSELLKIILSQIEPLTEQQLMGICGLQQSTQEAEDALSQGLEALNHSLSDTI
ASDALSCPQNMANYMGQMALAMNKLSTLEGFVRQADNLRHQTIHRLHQLLTTRQAARCFL
AIAEYFHRLRALSSLWLARPRQE

Transcript Sequence

Gene sequence data has not been registered.